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北京大学 [2]
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期刊论文 [12]
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Soil biota, antimicrobial resistance and planetary health
期刊论文
ENVIRONMENT INTERNATIONAL, 2019, 卷号: 131, 页码: -
作者:
Zhu, Yong-Guan
;
Zhao, Yi
;
Zhu, Dong
;
Gillings, Michael
;
Penuelas, Josep
收藏
  |  
浏览/下载:11/0
  |  
提交时间:2020/09/09
Planetary health
Human health
Soil microbiome
Antimicrobials
Resistome
Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China
期刊论文
MICROBIOME, 2017, 卷号: 5, 期号: 0, 页码: -
作者:
An, Xin-Li
;
Gillings, Michael R.
;
Chen, Hong
;
Zhang, Tong
;
Zhu, Yong-Guan
收藏
  |  
浏览/下载:23/0
  |  
提交时间:2018/07/29
Antibiotic Resistance
Environment
Pollution
Evolution
Human Gut Microbiome
gCoda: Conditional Dependence Network Inference for Compositional Data
其他
2017-01-01
Fang, Huaying
;
Huang, Chengcheng
;
Zhao, Hongyu
;
Deng, Minghua
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2017/12/03
compositional data
direct interaction
inverse covariance matrix
microbial network
latent variable model
majorization-minimization algorithm
HUMAN MICROBIOME
LASSO
SELECTION
MODELS
Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China
期刊论文
MICROBIOME, 2017, 卷号: 5
作者:
Su, Jian-Qiang[1]
;
An, Xin-Li[1,2]
;
Li, Bing[5]
;
Chen, Qing-Lin[1,2]
;
Gillings, Michael R.[6]
收藏
  |  
浏览/下载:8/0
  |  
提交时间:2019/04/24
Antibiotic resistance
Environment
Pollution
Evolution
Human gut microbiome
HuMiChip2 for strain level identification and functional profiling of human microbiomes
期刊论文
Applied Microbiology and Biotechnology, 2017, 卷号: 101, 期号: 1, 页码: 423-435
作者:
Tu, Qichao
;
Li, Jiabao
;
Shi, Zhou
;
Chen, Yanfei
;
Lin, Lu
收藏
  |  
浏览/下载:5/0
  |  
提交时间:2019/12/23
HuMiChip2
Microbial ecological microarray
Strain-level identification
Functional profiling
Human microbiome
Microbiome Data Representation by Joint Nonnegative Matrix Factorization with Laplacian Regularization
期刊论文
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2017, 卷号: 14, 期号: 2, 页码: 353-359
作者:
Jiang, Xingpeng*
;
Hu, Xiaohua
;
Xu, Weiwei
收藏
  |  
浏览/下载:9/0
  |  
提交时间:2019/12/23
Human microbiome
nonnegative matrix factorization
multi-view clustering
data integration
data representation
Microbiome Data Representation by Joint Nonnegative Matrix Factorization with Laplacian Regularization
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2017, 卷号: 14, 期号: 2
作者:
Jiang, Xingpeng
;
Hu, Xiaohua
;
Xu, Weiwei
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/05
Human microbiome
nonnegative matrix factorization
multi-view clustering
data integration
data representation
Multi-view clustering microbiome data by joint symmetric nonnegative matrix factorization with Laplacian regularization
期刊论文
2016 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2016, 页码: 625-630
作者:
Ma, Yuanyuan
;
Hu, Xiaohua
;
He, Tingting
;
Jiang, Xingpeng*
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  |  
浏览/下载:4/0
  |  
提交时间:2019/12/23
Human Microbiome
Laplacian Regularization
Multi-view Clustering
Symmetric Nonnegative Matrix Factorization
An efficient visualisation method for exploring latent patterns in large microbiome expression data sets
期刊论文
INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2016, 卷号: 15, 期号: 1
作者:
Xu, Weiwei
;
Schultz, Timothy
;
Xie, Rong
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/05
data visualisation
metagenomics
human microbiome project
Laplacian regularisation
non-negative matrix factorisation
augmented Barnes Hut t-SNE
vantage point tree
dimensionality reduction
approximate similarity search
multidimensional scaling
CCLasso: correlation inference for compositional data through Lasso
其他
2015-01-01
Fang, Huaying
;
Huang, Chengcheng
;
Zhao, Hongyu
;
Deng, Minghua
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2017/12/03
HUMAN MICROBIOME
SELECTION
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