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Exploiting higher-order patterns for community detection in attributed graphs
期刊论文
INTEGRATED COMPUTER-AIDED ENGINEERING, 2021, 卷号: 28, 期号: 2, 页码: 207-218
作者:
Hu, L (Hu, Lun)[ 1 ]
;
Pan, XY (Pan, Xiangyu)[ 2 ]
;
Yan, H (Yan, Hong)[ 3 ]
;
Hu, PW (Hu, Pengwei)[ 4 ]
;
He, TT (He, Tiantian)[ 5 ]
收藏
  |  
浏览/下载:34/0
  |  
提交时间:2021/05/10
Attributed graph
community detection
clustering
higher-order patterns
MeSHHeading2vec: a new method for representing MeSH headings as vectors based on graph embedding algorithm
期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 2, 页码: 2085-2095
作者:
Guo,ZH (Guo, Zhen-Hao) 1
;
You,ZH (You,Zhu-Hong) 1, 2
;
Huang,DS (Huang, De-Shuang) 3, 4
;
Yi, HC (Yi, Hai-Cheng) 2
;
Zheng, K (Zheng, Kai) 5
收藏
  |  
浏览/下载:147/0
  |  
提交时间:2021/08/09
MeSHHeading2vecMeSH relationship networkgraph embeddingcomputational prediction model
HiSCF: leveraging higher-order structures for clustering analysis in biological networks
期刊论文
BIOINFORMATICS, 2021, 卷号: 37, 期号: 4, 页码: 542-550
作者:
Hu, L (Hu, Lun) 1 , 2
;
Zhang, J (Zhang, Jun) 2
;
Pan, XY (Pan, Xiangyu) 2
;
Yan, H (Yan, Hong) 3
;
You, ZH (You, Zhu-Hong) 1
收藏
  |  
浏览/下载:17/0
  |  
提交时间:2021/09/22
A deep learning-based method for drug-target interaction prediction based on long short-term memory neural network
期刊论文
BMC MEDICAL INFORMATICS AND DECISION MAKING, 2020, 卷号: 20, 期号: 1, 页码: 1-9
作者:
Wang, YB (Wang, Yan-Bin)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 1 ]
;
Yang, S (Yang, Shan)[ 1 ]
;
Yi, HC (Yi, Hai-Cheng)[ 1,2 ]
;
Chen, ZH (Chen, Zhan-Heng)[ 1,2 ]
收藏
  |  
浏览/下载:34/0
  |  
提交时间:2020/04/21
Drug-target
Deep learning
Legendre moment
Long short-term memory
A learning based framework for diverse biomolecule relationship prediction in molecular association network
期刊论文
COMMUNICATIONS BIOLOGY, 2020, 卷号: 3, 期号: 1, 页码: 1-9
作者:
Guo, ZH (Guo, Zhen-Hao)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 1,2 ]
;
Huang, DS (Huang, De-Shuang)[ 3 ]
;
Yi, HC (Yi, Hai-Cheng)[ 1,2 ]
;
Chen, ZH (Chen, Zhan-Heng)[ 1,2 ]
收藏
  |  
浏览/下载:37/0
  |  
提交时间:2020/04/21
RPI-SE: a stacking ensemble learning framework for ncRNA-protein interactions prediction using sequence information
期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 期号: 1, 页码: 1-10
作者:
Yi, HC (Yi, Hai-Cheng)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 1,2 ]
;
Wang, MN (Wang, Mei-Neng)[ 3 ]
;
Guo, ZH (Guo, Zhen-Hao)[ 1 ]
;
Wang, YB (Wang, Yan-Bin)[ 1 ]
收藏
  |  
浏览/下载:23/0
  |  
提交时间:2020/04/21
Sequence analysis
RNA-protein interaction
ncRNA
Ensemble learning
Position weight matrix
Legendre moments
Prediction of Drug-Target Interactions From Multi-Molecular Network Based on Deep Walk Embedding Model
期刊论文
FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 2020, 卷号: 8, 期号: 6, 页码: 1-9
作者:
Chen, ZH (Chen, Zhan-Heng)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 1,2 ]
;
Guo, ZH (Guo, Zhen-Hao)[ 1,2 ]
;
Yi, HC (Yi, Hai-Cheng)[ 1,2 ]
;
Luo, GX (Luo, Gong-Xu)[ 1,2 ]
收藏
  |  
浏览/下载:37/0
  |  
提交时间:2020/09/09
drug-target interactions
molecular association network
attribute feature
behavior feature
random forest
Bioentity2vec: Attribute- and behavior-driven representation for predicting multi-type relationships between bioentities
期刊论文
GIGASCIENCE, 2020, 卷号: 9, 期号: 6, 页码: 1-12
作者:
Guo, ZH (Guo, Zhen-Hao)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 1,2 ]
;
Wang, YB (Wang, Yan-Bin)[ 3 ]
;
Huang, DS (Huang, De-Shuang)[ 4 ]
;
Yi, HC (Yi, Hai-Cheng)[ 1,2 ]
收藏
  |  
浏览/下载:39/0
  |  
提交时间:2020/11/04
network biology
system biology
Bioentity2vec
multi-type relationship prediction
A Joint Back-Translation and Transfer Learning Method for Low-Resource Neural Machine Translation
期刊论文
MATHEMATICAL PROBLEMS IN ENGINEERING, 2020, 卷号: 2020, 期号: 5, 页码: 1-11
作者:
Luo, GX (Luo, Gong-Xu)[ 1,2,3 ]
;
Yang, YT (Yang, Ya-Ting)[ 1,2,3 ]
;
Dong, R (Dong, Rui)[ 1,2,3 ]
;
Chen, YH (Chen, Yan-Hong)[ 1,2,3 ]
;
Zhang, WB (Zhang, Wen-Bo)[ 1,2,3 ]
收藏
  |  
浏览/下载:46/0
  |  
提交时间:2020/11/04
Identification of potential drug-targets by combining evolutionary information extracted from frequency profiles and molecular topological structures
期刊论文
CHEMICAL BIOLOGY & DRUG DESIGN, 2020, 卷号: 96, 期号: 2, 页码: 758-767
作者:
Wang, L (Wang, Lei)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 2 ]
;
Li, LP (Li, Li-Ping)[ 2 ]
;
Yan, X (Yan, Xin)[ 3 ]
;
Zhang, W (Zhang, Wei)[ 1 ]
收藏
  |  
浏览/下载:55/0
  |  
提交时间:2020/11/04
drug-target interaction
rotation forest
two-dimensional principal component analysis
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