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北京大学 [12]
大连理工大学 [12]
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山东大学 [6]
上海大学 [4]
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期刊论文 [67]
会议论文 [12]
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Two new methods for identifying essential proteins based on the protein complexes and topological properties
期刊论文
IEEE Access, 2020, 卷号: 8, 页码: 9578-9586
作者:
Lu, Pengli
;
Yu, Jingjuan
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2020/11/14
Complex networks
Topology
Yeast
Biological evolution
Essential proteins
Experimental materials
Protein complexes
Protein interaction networks
Protein-protein interaction networks
Topological properties
Topological structure
DNN-PPI:A largescale prediction of protein-protein interactions based on deep neural networks.
期刊论文
Journal of Biological Systems., 2019
作者:
YUANMIAO GUI
;
RUJING WANG,
;
YUANYUAN WEI
;
Wang X(王雪)
收藏
  |  
浏览/下载:14/0
  |  
提交时间:2021/12/15
Deep Neural Networks
Prediction
Protein–Protein Interaction
A novel conjoint triad auto covariance (CTAC) coding method for predicting protein-protein interaction based on amino acid sequence.
期刊论文
Mathematical Biosciences, 2019
作者:
Wang X(王雪)
收藏
  |  
浏览/下载:6/0
  |  
提交时间:2021/12/15
Deep neural networks
Protein-protein interaction
Conjoint triad auto covariance
Detection of protein complexes from multiple protein interaction networks using graph embedding
期刊论文
ARTIFICIAL INTELLIGENCE IN MEDICINE, 2019, 卷号: 96, 页码: 107-115
作者:
Liu, Xiaoxia
;
Yang, Zhihao
;
Sang, Shengtian
;
Lin, Hongfei
;
Wang, Jian
收藏
  |  
浏览/下载:115/0
  |  
提交时间:2019/12/02
Network embedding
Protein complex identification
Protein-protein interaction networks
A multi-task learning based approach to biomedical entity relation extraction
会议论文
Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
作者:
Li, Q.
;
Yang, Z.
;
Luo, L.
;
Wang, L.
;
Zhang, Y.
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  |  
浏览/下载:9/0
  |  
提交时间:2019/12/02
Bioinformatics
Data mining
Drug interactions
Learning systems
Natural language processing systems
Neural networks
Proteins, Automatic extraction
Biomedical text minings
Drug-drug interactions
Entity relation extractions
Multitask learning
Protein-protein interaction extractions
Relation extraction
Shared information, Extraction
Protein Complexes Detection Based on Global Network Representation Learning
会议论文
Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
作者:
Xu, B.
;
Li, K.
;
Liu, X.
;
Liu, D.
;
Zhang, Y.
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  |  
浏览/下载:7/0
  |  
提交时间:2019/12/02
Bioinformatics
Embeddings
Proteins, Biological information
Cellular organization
Global representation
Network embedding
Ppi networks
Protein complexes
Protein-protein interaction networks
Vector representations, Complex networks
Hierarchical Recurrent Convolutional Neural Network for Chemical-protein Relation Extraction from Biomedical Literature
会议论文
Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
作者:
Sun, C.
;
Yang, Z.
;
Wang, L.
;
Zhang, Y.
;
Lin, H.
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  |  
浏览/下载:13/0
  |  
提交时间:2019/12/02
Bioinformatics
Chemical analysis
Clinical research
Convolution
Extraction
Neural networks
Proteins, Attention mechanisms
Biomedical literature
Convolutional neural network
Hierarchical RCNN
Linguistic analysis
Protein interaction
Relation extraction
State-of-the-art system, Indicators (chemical)
A Weak Supervised Learning Method for Essential Protein Detection Based on STRING Database and Learning Representation
会议论文
Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
作者:
Wang, Z.
;
Sun, Y.
;
Guan, Y.
;
Zhang, Y.
;
Yang, L.
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  |  
浏览/下载:8/0
  |  
提交时间:2019/12/02
Bioinformatics
Chemical detection
Database systems
Learning systems
Machine learning
Proteins
Supervised learning
Topology, Biological information
Classification methods
Essential proteins
Learning Representation
Machine learning classification
Protein-protein interaction networks
Supervised learning methods
Topological features, Learning algorithms
Predicting disease-related genes by path structure and community structure in protein-protein networks
期刊论文
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2018, 页码: 22
作者:
Hu, Ke
;
Hu, Jing-Bo
;
Tang, Liang
;
Xiang, Ju
;
Ma, Jin-Long
收藏
  |  
浏览/下载:25/0
  |  
提交时间:2019/01/11
random graphs
networks
protein interaction networks
Rpirls: quantitative predictions of rna interacting with any protein of known sequence
期刊论文
Molecules, 2018, 卷号: 23, 期号: 3, 页码: 14
作者:
Shen, Wen-Jun
;
Cui, Wenjuan
;
Chen, Danze
;
Zhang, Jieming
;
Xu, Jianzhen
收藏
  |  
浏览/下载:35/0
  |  
提交时间:2019/05/09
Protein-rna interactions
Lncrna-protein interaction networks
Derived kernel
Regularized least squares
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