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Two new methods for identifying essential proteins based on the protein complexes and topological properties
期刊论文
IEEE Access, 2020, 卷号: 8, 页码: 9578-9586
作者:
Lu, Pengli
;
Yu, Jingjuan
收藏
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浏览/下载:2/0
  |  
提交时间:2020/11/14
Complex networks
Topology
Yeast
Biological evolution
Essential proteins
Experimental materials
Protein complexes
Protein interaction networks
Protein-protein interaction networks
Topological properties
Topological structure
A Weak Supervised Learning Method for Essential Protein Detection Based on STRING Database and Learning Representation
会议论文
Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
作者:
Wang, Z.
;
Sun, Y.
;
Guan, Y.
;
Zhang, Y.
;
Yang, L.
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  |  
浏览/下载:8/0
  |  
提交时间:2019/12/02
Bioinformatics
Chemical detection
Database systems
Learning systems
Machine learning
Proteins
Supervised learning
Topology, Biological information
Classification methods
Essential proteins
Learning Representation
Machine learning classification
Protein-protein interaction networks
Supervised learning methods
Topological features, Learning algorithms
A Weak Supervised Learning Method for Essential Protein Detection Based on STRING Database and Learning Representation
会议论文
PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2018-01-01
作者:
Wang, Zhizheng
;
Sun, Yuanyuan
;
Guan, Yawen
;
Zhang, Yibin
;
Yang, Liang
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  |  
浏览/下载:4/0
  |  
提交时间:2019/12/02
Essential Proteins
Biological Information
Learning Representation
Machine Learning
Weak Supervised Learning
Detecting Essential Proteins Based on Network Topology, Gene Expression Data, and Gene Ontology Information
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2018, 卷号: 15, 期号: 1
作者:
Zhang, Wei
;
Xu, Jia
;
Li, Yuanyuan
;
Zou, Xiufen
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  |  
浏览/下载:1/0
  |  
提交时间:2019/12/05
Protein-protein interaction network
essential proteins
gene ontology
gene expression profile
United Complex Centrality for Identification of Essential Proteins from PPI Networks
期刊论文
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2017, 卷号: 14, 期号: 2, 页码: 370-380
作者:
Li, Min*
;
Lu, Yu
;
Niu, Zhibei
;
Wu, Fang-Xiang
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  |  
浏览/下载:4/0
  |  
提交时间:2019/12/03
United complex centrality
essential proteins
PPI network
protein complexes
Prediction of essential proteins based on subcellular localization and gene expression correlation
期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 470
作者:
Fan, Yetian
;
Tang, Xiwei
;
Hu, Xiaohua
;
Wu, Wei
;
Ping, Qing
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  |  
浏览/下载:3/0
  |  
提交时间:2019/12/03
Essential proteins
Subcellular localization information
Modified PageRank algorithm
Protein-protein interaction networks
Essential proteins discovery methods based on the protein-protein interaction networks
期刊论文
American Journal of Biochemistry and Biotechnology, 2017, 卷号: 13, 期号: 4, 页码: 242-251
作者:
Zhu, Ling Zhi
;
Zhang, Junling
;
He, Lingya
;
Wang, Jun
;
Peng, Zhenwu
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  |  
浏览/下载:2/0
  |  
提交时间:2019/12/24
Essential proteins
Network centrality
Network topology
Protein complexes
Protein-protein interaction networks
Subcellular localization information
Predicting essential proteins based on subcellular localization, orthology and PPI networks
期刊论文
BMC Bioinformatics, 2016, 卷号: 17, 期号: 8, 页码: 279
作者:
Li, Gaoshi
;
Li, Min*
;
Wang, Jianxin*
;
Wu, Jingli
;
Wu, Fang-Xiang
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  |  
浏览/下载:3/0
  |  
提交时间:2019/12/03
Essential proteins
Orthology
Protein-protein interaction network
Subcellular localization
In vivo metabolic labeling of sialoglycans in the mouse brain by using a liposome-assisted bioorthogonal reporter strategy
期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2016
Xie, Ran
;
Dong, Lu
;
Du, Yifei
;
Zhu, Yuntao
;
Hua, Rui
;
Zhang, Chen
;
Chen, Xing
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2017/12/03
brain
sialic acid
live imaging
glycoproteomics
histochemistry
SIALIC-ACID
POLYSIALIC ACID
LIVING ANIMALS
NERVOUS-SYSTEM
SYNAPTIC-TRANSMISSION
ESSENTIAL NUTRIENT
MODIFIED PROTEINS
RAT-BRAIN
GANGLIOSIDES
BARRIER
Structural basis for the interaction of BamB with the POTRA3-4 domains of BamA.
期刊论文
Acta Crystallogr D Struct Biol, 2016, 卷号: Vol.72 Part 2, 页码: 236-244
作者:
Chen,Zhen
;
Dong,Yu-Hui
;
Gao,Zeng-Qiang
;
Xu,Jian-Hua
;
Hou,Hai-Feng
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/04/22
BARREL ASSEMBLY MACHINERY
OUTER-MEMBRANE PROTEINS
ESCHERICHIA-COLI BAMB
CRYSTAL-STRUCTURE
ESSENTIAL COMPONENT
PERIPLASMIC DOMAIN
YAET COMPLEX
BIOGENESIS
ROLES
FLEXIBILITY
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