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山东大学 [5]
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期刊论文 [17]
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A graph-based algorithm for estimating clonal haplotypes of tumor sample from sequencing data.
期刊论文
BMC medical genomics, 2019, 卷号: 12, 页码: 27
作者:
Wang Yixuan
;
Zhang Xuanping
;
Ding Shuai
;
Geng Yu
;
Liu Jianye
收藏
  |  
浏览/下载:14/0
  |  
提交时间:2019/11/19
Clonal haplotype
Sequencing data analysis
Computational pipeline
Cancer genomics
Haplotype phasing
An Integrated Framework for Identifying Mutated Driver Pathway and Cancer Progression
期刊论文
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2019, 卷号: Vol.16 No.2, 页码: 455-464
作者:
Wei Zhang
;
Shu-Lin Wang
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  |  
浏览/下载:120/0
  |  
提交时间:2019/12/13
Cancer
Uncertainty
Bayes methods
Evolution (biology)
Computational modeling
Indexes
Genomics
Driver pathway
cancer progression
somatic mutation
discrete differential evolution
Bayesian network
An Integrated Framework for Identifying Mutated Driver Pathway and Cancer Progression
期刊论文
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2019, 卷号: Vol.16 No.2, 页码: 455-464
作者:
Zhang, W
;
Wang, SL
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  |  
浏览/下载:11/0
  |  
提交时间:2019/12/13
Cancer
Uncertainty
Bayes Methods
Evolution Biology
Computational Modeling
Indexes
Genomics
Driver Pathway
Cancer Progression
Somatic Mutation
Discrete Differential Evolution
Bayesian Network
Computational Prediction of Sigma-54 Promoters in Bacterial Genomes by Integrating Motif Finding and Machine Learning Strategies
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2019, 卷号: 16, 期号: 4, 页码: 1211-1218
作者:
Liu, Bingqiang
;
Han, Ling
;
Liu, Xiangrong
;
Wu, Jichang
;
Ma, Qin
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  |  
浏览/下载:6/0
  |  
提交时间:2019/12/11
Computational genomics
DNA motifs
gene transcription
machine learning
A 2-approximation algorithm for the complementary maximal strip recovery problem
期刊论文
Leibniz International Proceedings in Informatics, LIPIcs, 2019, 卷号: 128
作者:
Jiang, Haitao
;
Guo, Jiong
;
Zhu, Daming
;
Zhu, Binhai
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  |  
浏览/下载:16/0
  |  
提交时间:2019/12/11
Approximation algorithm
Complementary maximal strip recovery
Computational genomics
Local search
Maximal strip recovery
Computational prediction of sigma-54 promoters in bacterial genomes by integrating motif finding and machine learning strategies
期刊论文
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2018
作者:
Liu B.
;
Han L.
;
Liu X.
;
Wu J.
;
Ma Q.
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  |  
浏览/下载:2/0
  |  
提交时间:2019/12/11
Computational genomics
DNA motifs
Gene transcription
Machine learning
Multi-label Deep Learning for Gene Function Annotation in Cancer Pathways
期刊论文
SCIENTIFIC REPORTS, 2018, 卷号: Vol.8
作者:
Guan, RC
;
Wang, X
;
Yang, MQ
;
Zhang, Y
;
Zhou, FF
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  |  
浏览/下载:2/0
  |  
提交时间:2019/12/26
Computational
biology
and
bioinformatics
Genomics
Integrative cancer genomics: models, algorithms and analysis
期刊论文
FRONTIERS OF COMPUTER SCIENCE, 2017, 卷号: 11, 期号: 3, 页码: 392-406
作者:
Chen, Jinyu
;
Zhang, Shihua
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  |  
浏览/下载:22/0
  |  
提交时间:2018/07/30
cancer genomics
model
algorithm
data integration
bioinformatics
computational biology
Guidelines for Genome-Scale Analysis of Biological Rhythms
期刊论文
JOURNAL OF BIOLOGICAL RHYTHMS, 2017, 卷号: 32, 期号: 5
作者:
Hughes, Michael E.
;
Abruzzi, Katherine C.
;
Allada, Ravi
;
Anafi, Ron
;
Arpat, Alaaddin Bulak
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  |  
浏览/下载:25/0
  |  
提交时间:2019/12/05
circadian rhythms
diurnal rhythms
computational biology
functional genomics
systems biology
guidelines
biostatistics
RNA-seq
ChIP-seq
proteomics
metabolomics
An Integrated Framework for Identifying Mutated Driver Pathway and Cancer Progression
期刊论文
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2017, 页码: 1
作者:
Zhang, Wei
;
Wang, Shulin
收藏
  |  
浏览/下载:9/0
  |  
提交时间:2019/12/31
Cancer
Uncertainty
Bayes methods
Evolution (biology)
Computational modeling
Indexes
Genomics
Driver pathway
cancer progression
somatic mutation
discrete differential evolution
Bayesian Network
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