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BiTSC2: Bayesian inference of tumor clonal tree by joint analysis of single-cell SNV and CNA data
期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 页码: 12
作者:
Chen, Ziwei
;
Gong, Fuzhou
;
Wan, Lin
;
Ma, Liang
收藏
  |  
浏览/下载:24/0
  |  
提交时间:2022/06/21
single-cell DNA sequencing
intra-tumor heterogeneity
single nucleotide variation
copy number alteration
Bayesian modeling
cancer evolution
Accucopy: accurate and fast inference of allele-specific copy number alterations from low-coverage low-purity tumor sequencing data
期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 18
作者:
Fan, Xinping
;
Luo, Guanghao
;
Huang, Yu S.
收藏
  |  
浏览/下载:218/0
  |  
提交时间:2021/05/24
Cancer genomics
Copy number alterations
Next-generation sequencing
Decreased mitochondrial DNA copy number in nerve cells and the hippocampus during nicotine exposure is mediated by autophagy
期刊论文
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 2021, 卷号: 226
作者:
Wang, Hongjuan
;
Chen, Huan
;
Han, Shulei
;
Fu, Yaning
;
Tian, Yushan
收藏
  |  
浏览/下载:123/0
  |  
提交时间:2021/11/15
nicotine
mtDNA copy number
autophagy
mitochondrial abnormalities
Coupling between Ribotypic and Phenotypic Traits of Protists across Life Cycle Stages and Temperatures
期刊论文
MICROBIOLOGY SPECTRUM, 2021, 卷号: 9, 期号: 3, 页码: 19
作者:
Zou, Songbao
;
Fu, Rao
;
Deng, Huiwen
;
Zhang, Qianqian
;
Gentekaki, Eleni
收藏
  |  
浏览/下载:21/0
  |  
提交时间:2022/08/13
cell size
copy number variation
growth rate
life cycle
warming
Dependence of genome size and copy number of rRNA gene on cell volume in dinoflagellates
期刊论文
HARMFUL ALGAE, 2021, 卷号: 109, 页码: 13
作者:
Liu, Yuyang
;
Hu, Zhangxi
;
Deng, Yunyan
;
Shang, Lixia
;
Gobler, Christopher J.
收藏
  |  
浏览/下载:46/0
  |  
提交时间:2021/12/02
LSU rRNA gene copy number
Genome size
Cell volume
Co-evolution
Dinoflagellate
Seagrass (Zostera marina) promotes nitrification potential and selects specific ammonia oxidizers in coastal sediments
期刊论文
JOURNAL OF SOILS AND SEDIMENTS, 2021, 页码: 15
作者:
Lin, Xianbiao
;
Zheng, Pengfei
;
Zou, Songbao
;
Sun, Feifei
;
Zhang, Xiaoli
收藏
  |  
浏览/下载:62/0
  |  
提交时间:2021/06/07
Seagrass meadow
Potential nitrification rates
Relative importance
Gene copy number
Specific lineage
Highly Recurrent Copy Number Variations inGABRB2Associated With Schizophrenia and Premenstrual Dysphoric Disorder
期刊论文
FRONTIERS IN PSYCHIATRY, 2020, 卷号: 11, 页码: 9
作者:
Ullah, Ata
;
Long, Xi
;
Mat, Wai-Kin
;
Hu, Taobo
;
Khan, Muhammad Ismail
收藏
  |  
浏览/下载:49/0
  |  
提交时间:2020/08/24
GABAA receptors
schizophrenia
premenstrual dysphoric disorder
copy number variations
genetic factors
Association analysis of KMT2D copy number variation as a positional candidate for growth traits
期刊论文
GENE, 2020, 卷号: 753
作者:
Cheng, Jie
;
Jiang, Rui
;
Yang, Yu
;
Cao, Xiukai
;
Huang, Yongzhen
收藏
  |  
浏览/下载:13/0
  |  
提交时间:2020/11/25
Copy number variations
KMT2D
Association analysis
Growth traits
Integrating Genome-Wide CNVs Into QTLs and High Confidence GWAScore Regions Identified Positional Candidates for Sheep Economic Traits
期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11
作者:
Cheng, Jie
;
Cao, Xiukai
;
Hanif, Quratulain
;
Pi, Li
;
Hu, Linyong
收藏
  |  
浏览/下载:20/0
  |  
提交时间:2020/11/25
copy number variations
QTL
GWAS
GWAScore
sheep economic traits
Copy Number Variation of the PIGY Gene in Sheep and Its Association Analysis with Growth Traits
期刊论文
ANIMALS, 2020, 卷号: 10, 期号: 4
作者:
Feng, Ziting
;
Li, Xinyu
;
Cheng, Jie
;
Jiang, Rui
;
Huang, Ruolan
收藏
  |  
浏览/下载:34/0
  |  
提交时间:2020/11/25
copy number variation (CNV)
PIGY gene
growth traits
sheep
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