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Consistent rationalization of type-2 topoisomerases' unknotting, decatenating, supercoil-relaxing actions and their scaling relation
期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2015
Liu, Zhirong
;
Chan, Hue Sun
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2017/12/03
wormlike DNA model
writhe
hooked-juxtaposition hypothesis
the bend-angle model
II DNA TOPOISOMERASES
NONEQUILIBRIUM TOPOLOGY SIMPLIFICATION
LOCAL JUXTAPOSITION GEOMETRY
ESCHERICHIA-COLI
CHIRAL DISCRIMINATION
STRUCTURAL BASIS
KNOTS
IV
MECHANISM
SELECTION
Compressed wormlike chain moving out of confined space: A model of DNA ejection from bacteriophage
期刊论文
ACTA MECHANICA SINICA, 2012, 卷号: 28, 期号: 4, 页码: 1219-1226
作者:
Wang, JZ
;
Li, L
;
Gao, HJ
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2015/12/22
DNA ejection
Bacteriophage
Wormlike chain model
Confined semi-flexible polymer
Drag coefficient
An effective bead-spring model for polymer simulation
期刊论文
2010, 2010
Liu, Bin
;
Wang, Jizeng
;
Fan, Xiaojun
;
Kong, Yong
;
Gao, Huajian
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  |  
浏览/下载:5/0
Local site preference rationalizes disentangling by DNA topoisomerases
期刊论文
PHYSICAL REVIEW E, 2010, 卷号: 81, 期号: 3
作者:
Liu, Zhirong
;
Zechiedrich, Lynn
;
Chan, Hue Sun
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  |  
浏览/下载:12/0
  |  
提交时间:2019/04/09
Local site preference rationalizes disentangling by DNA topoisomerases
期刊论文
physical review e, 2010
Liu, Zhirong
;
Zechiedrich, Lynn
;
Chan, Hue Sun
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2015/11/13
JUXTAPOSITION GEOMETRY
II TOPOISOMERASES
STRUCTURAL BASIS
CIRCULAR DNA
TOPOLOGY
KNOTS
SIMPLIFICATION
SIMULATIONS
MECHANISM
Efficient chain moves for Monte Carlo simulations of a wormlike DNA model: Excluded volume, supercoils, site juxtapositions, knots, and comparisons with random-flight and lattice models (vol 128, 145104, 2008)
期刊论文
journal of chemical physics, 2009
Liu, Zhirong
;
Chan, Hue Sun
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浏览/下载:2/0
  |  
提交时间:2015/11/10
DNA
molecular biophysics
Monte Carlo methods
Efficient chain moves for Monte Carlo simulations of a wormlike DNA model: Excluded volume, supercoils, site juxtapositions, knots, and comparisons with random-flight and lattice models
期刊论文
journal of chemical physics, 2008
Liu, Zhirong
;
Chan, Hue Sun
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  |  
浏览/下载:3/0
  |  
提交时间:2015/11/12
Effects of chain flexibility on polymer conformation in dilute solution studied by lattice Monte Carlo simulation
期刊论文
journal of physical chemistry b, 2006, 卷号: 110, 期号: 46, 页码: 23502-23506
Li YQ
;
Huang QR
;
Shi TF
;
An LJ
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  |  
浏览/下载:16/0
  |  
提交时间:2010/08/17
BOVINE SERUM-ALBUMIN
RANDOM-FLIGHT CHAIN
PERSISTENCE LENGTH
SINGLE-MOLECULE
DNA
DYNAMICS
PROTEIN
SHAPE
SCATTERING
MACROMOLECULES
Bending and twisting elasticity: A revised Marko-Siggia model on DNA chirality
期刊论文
PHYSICAL REVIEW E, 1998, 卷号: 58, 期号: 4, 页码: 4816-4819
作者:
Ou-Yang, ZC
;
Zhou, HJ
;
Zhou, HJ , Chinese Acad Sci, Inst Theoret Phys, POB 100080, Beijing 100080, Peoples R China.
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浏览/下载:8/0
  |  
提交时间:2012/08/29
Molecule
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