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科研机构
华中师范大学 [22]
内容类型
期刊论文 [20]
会议论文 [2]
发表日期
2018 [2]
2017 [3]
2016 [4]
2015 [6]
2014 [4]
2013 [2]
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专题:华中师范大学
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Nonlinear expression and visualization of nonmetric relationships in genetic diseases and microbiome data
期刊论文
BMC Bioinformatics, 2018, 卷号: 19, 期号: 20, 页码: 505
作者:
Zhu, Xianchao
;
Shen, Xianjun*
;
Jiang, Xingpeng
;
Wei, Kaiping
;
He, Tingting
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/23
Data visualization
Multiple maps t-SNE
Nesterov momentum
Non-metric similarities
High-order Organization of Weighted Microbial Interaction Network
会议论文
IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Madrid, SPAIN, DEC 03-06, 2018
作者:
Shen, Xianjun*
;
Gong, Xue
;
Jiang, Xingpeng*
;
Yang, Jincai
;
He, Tingting
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/12/23
weighted Directed motifs
microbial network
high order structures
motif-based clustering
Visualization of non-metric relationships by adaptive learning multiple maps t-SNE regularization
期刊论文
2017 IEEE INTERNATIONAL CONFERENCE ON BIG DATA (BIG DATA), 2017, 页码: 3882-3887
作者:
Shen, Xianjun
;
Zhu, Xianchao
;
Jiang, Xingpeng
;
Gao, Li
;
He, Tingting
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/23
machine learning
phenotypic visualization
Nesterov momentum
peeking ahead
RMSProp
adaptative learning method
Identifying protein complex by integrating characteristic of core-attachment into dynamic PPI network
期刊论文
PLOS ONE, 2017, 卷号: 12, 期号: 10, 页码: e0186134
作者:
Shen, Xianjun*
;
Yi, Li
;
Jiang, Xingpeng
;
He, Tingting
;
Yang, Jincai
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/23
Protein complexes,Algorithms,Protein interaction networks,Gene expression,Protein interactions,Forecasting,Genetic networks,Protein structure prediction
Prioritizing disease-causing microbes based on random walking on the heterogeneous network
期刊论文
Methods, 2017, 卷号: 124, 页码: 120-125
作者:
Shen, Xianjun*
;
Chen, Yao
;
Jiang, Xingpeng
;
Hu, Xiaohua
;
He, Tingting
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/23
Disease network
Microbe network
Random walk
Heterogeneous network
Neighbor affinity based algorithm for discovering temporal protein complex from dynamic PPI network
期刊论文
Methods, 2016, 卷号: 110, 页码: 90-96
作者:
Shen, Xianjun
;
Yi, Li
;
Jiang, Xingpeng
;
Zhao, Yanli
;
Hu, Xiaohua
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/12/23
Temporal protein complex
Time course protein interaction networks
Clustering coefficient
Neighbor affinity
A novel identified temporal protein complexes strategy inspired by density-distance and brainstorming process
期刊论文
2016 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2016, 页码: 1269-1274
作者:
Shen, Xianjun
;
Zhou, Jin
;
Jiang, Xingpeng
;
Hu, Xiaohua
;
He, Tingting
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/23
protein complex
dynamic protein-protein interaction network
cluster center
gene ontology information
brainstorming process
Mining Temporal Protein Complex Based on the Dynamic PIN Weighted with Connected Affinity and Gene Co-Expression
期刊论文
PLOS ONE, 2016, 卷号: 11, 期号: 4, 页码: e0153967
作者:
Shen, Xianjun
;
Yi, Li
;
Jiang, Xingpeng
;
He, Tingting
;
Hu, Xiaohua
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/23
Protein complexes,Protein interactions,Protein interaction networks,Gene expression,Algorithms,Molecular evolution,Protein expression,Protein metabolism
Identifying protein complexes based on brainstorming strategy
期刊论文
Methods, 2016, 卷号: 110, 页码: 44-53
作者:
Shen, Xianjun
;
Zhou, Jin
;
Yi, Li
;
Hu, Xiaohua
;
He, Tingting
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/23
Protein-protein interaction network
Protein complex
Brainstorming strategy
Gene ontology
An integrated approach to identify protein complex based on best neighbour and modularity increment
期刊论文
International Journal of Data Mining and Bioinformatics, 2015, 卷号: 11, 期号: 4, 页码: 458-473
作者:
Shen, Xianjun*
;
Zhao, Yanli
;
Li, Yanan
;
Yi, Yang
;
He, Tingting
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/23
Best neighbour node
Modularity increment
Protein complexes
Protein-protein interactions network
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