Molecular systematics of subtribe Orchidinae and Asian taxa of Habenariinae (Orchideae, Orchidaceae) based on plastid matK, rbcL and nuclear ITS

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	Molecular systematics of subtribe Orchidinae and Asian taxa of Habenariinae (Orchideae, Orchidaceae) based on plastid matK, rbcL and nuclear ITS
	Jin, Wei-Tao 1; Jin, Xiao-Hua 1; Schuiteman, Andre 2; Li, De-Zhu3 ; Xiang, Xiao-Guo 1; Huang, Wei-Chang 4; Li, Jian-Wu 5; Huang, Lu-Qi 6
刊名	MOLECULAR PHYLOGENETICS AND EVOLUTION
	2014-08-01
卷号	77 页码:41-53
关键词	Asia Generic delimitation Habenariinae Molecular phylogenetics Orchidinae
ISSN号	1055-7903
通讯作者	Jin,XH (reprint author),Chinese Acad Sci,Inst Bot,State Key Lab Systemat & Evolutionary Bot,Beijing 10093,Peoples R China. ; jinweitao@ibcas.ac.cn ; orchid@ibcas.ac.cn ; A.Schuiteman@kew.org ; dzl@mail.kib.ac.cn ; xiangxg2010@ibcas.ac.cn ; hwc_zx@126.com ; ljw@xtbg.org.cn ; huangluqi01@126.com
英文摘要	The subtribe Orchidinae, distributed predominantly in Eastern Asia and the Mediterranean, presents some of the most intricate taxonomic problems in the family Orchidaceae with respect to generic delimitation. Based on three DNA markers (plastid matK, rbcL, and nuclear ITS), morphological characters, and a broad sampling of Orchidinae and selected Habenariinae mainly from Asia (a total of 153 accessions of 145 species in 31 genera), generic delimitation and phylogenetic relationships within the subtribe Orchidinae and Habenariinae from Asia were assessed. Orchidinae and Asian Habenariinae are monophyletic, and Orchidinae is divided into distinct superclades. Many genera, such as Amitostigma, Habenaria, Hemipilia, Herminium, Platanthera, Peristylus and Ponerorchis, are not monophyletic. Habenaria is subdivided into two distantly related groups, while Platanthera is subdivided into three even more disparate groups. Many previously undetected phylogenetic relationships, such as clades formed by the Amitostigma-Neottianthe-Ponerorchis complex, Platanthera latilabris group, Ponerorchis chrysea, Sirindhornia, and Tsaiorchis, are well supported by both molecular and morphological evidence. We propose to combine Hemipiliopsis with Hemipilia, Amitostigma and Neottian the with Ponerorchis, Smithorchis with Platanthera, and Aceratorchis and Neolindleya with Galearis, and to establish a new genus to accommodate Ponerorchis chrysea. Tsaiorchis and Sirindhornia are two distinctive genera supported by both molecular data and morphological characters. A new genus, Hsenhsua, and 41 new combinations are proposed based on these findings. (C) 2014 Elsevier Inc. All rights reserved.
学科主题	Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
类目[WOS]	Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
研究领域[WOS]	Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
关键词[WOS]	PLATANTHERA ORCHIDACEAE ; DNA-SEQUENCES ; GENUS ; PHYLOGENETICS ; EVOLUTION ; ORCHIDOIDEAE ; INCONGRUENCE ; INFERENCE ; CHINA ; TIBET
收录类别	SCI
资助信息	National Natural Science Foundation of China [31107176, 31311120061];Chinese Special Fund for Medicine Research in the Public Interest [201407003]
语种	英语
WOS记录号	WOS:000337929800006
公开日期	2014-07-28
内容类型	期刊论文
源URL	[http://ir.kib.ac.cn/handle/151853/18222]
专题	昆明植物研究所_中国西南野生生物种质资源库
作者单位	1.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 10093, Peoples R China 2.Royal Bot Gardens, Herbarium, Lib Art & Arch Directorate, Richmond TW9 3AB, Surrey, England 3.Chinese Acad Sci, Kunming Inst Bot, Key Lab Biodivers & Biogeog, Kunming 650204, Yunnan, Peoples R China 4.Shanghai Chenshan Bot Garden, Shanghai 201602, Peoples R China 5.Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Menglun 666303, Yunnan, Peoples R China 6.China Acad Chinese Med Sci, Natl Resource Ctr Chinese Mat Med, Beijing 100700, Peoples R China
推荐引用方式 GB/T 7714	Jin, Wei-Tao,Jin, Xiao-Hua,Schuiteman, Andre,et al. Molecular systematics of subtribe Orchidinae and Asian taxa of Habenariinae (Orchideae, Orchidaceae) based on plastid matK, rbcL and nuclear ITS[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION,2014,77:41-53.
APA	Jin, Wei-Tao.,Jin, Xiao-Hua.,Schuiteman, Andre.,Li, De-Zhu.,Xiang, Xiao-Guo.,...&Huang, Lu-Qi.(2014).Molecular systematics of subtribe Orchidinae and Asian taxa of Habenariinae (Orchideae, Orchidaceae) based on plastid matK, rbcL and nuclear ITS.MOLECULAR PHYLOGENETICS AND EVOLUTION,77,41-53.
MLA	Jin, Wei-Tao,et al."Molecular systematics of subtribe Orchidinae and Asian taxa of Habenariinae (Orchideae, Orchidaceae) based on plastid matK, rbcL and nuclear ITS".MOLECULAR PHYLOGENETICS AND EVOLUTION 77(2014):41-53.