Comparative Analysis of the Systematics and Evolution of the <i>Pampus</i> Genus of Fish (Perciformes: Stromateidae) Based on Osteology, Population Genetics and Complete Mitogenomes

doi:10.3390/ani14050814

CORC > 海洋研究所 > 中国科学院海洋研究所 > 实验海洋生物学重点实验室

	*Comparative Analysis of the Systematics and Evolution of the Pampus* Genus of Fish (Perciformes: Stromateidae) Based on Osteology, Population Genetics and Complete Mitogenomes**
	Zhang, Cheng 6; Liu, Hanjing 5; Huang, Xiang 6; Yuan, Zi 6; Zhang, Shun 6; Xu, Shanliang 6; Liu, Jing 3,4; Wang, Yajun 1,2,6; Wang, Danli 6; Hu, Jiabao 1,2,6
刊名	ANIMALS
	2024-03-01
卷号	14 期号:5 页码:19
关键词	Pampus osteology population genetics mitogenome species delimitation evolutionary history
ISSN号	2076-2615
DOI	10.3390/ani14050814
通讯作者	Wang, Yajun(wangyajun@nbu.edu.cn) ; Hu, Jiabao(zcmaple10086@163.com)
英文摘要	Simple Summary: Pampus is a genus of fish of commercial importance in Asia. This is a comprehensive study on the species delimitation and evolution history of Pampus species. This study integrated information on the skeletal structure and mitochondrial and nuclear molecular data of the genus Pampus to define their species delimitation. Based on these findings, we suggest that P. argenteus and P. echinogaster should be classified as the same species and P. liuorum is speculated to be a valid species. P. cinereus is closely related to P. minor, P. chinensis and P. punctatissimus, but these are different species. Pampus can be divided into six species: P. argenteus, P. punctatissimus, P. cinereus, P. chinensis, P. minor, and P. liuorum. The aim of this study was to resolve the controversies about the phylogeny and taxonomy of Pampus and provide a robust delimitation of Pampus for fisheries management. Pampus is a widespread species of fish in the western Pacific and Indian Oceans that has significant commercial worth. Its evolutionary history and phylogenetics are still poorly understood, and details on its intraspecific taxonomy are debatable, despite some morphological and molecular research. Here, we analyzed this species using skeletal structure data as well as nuclear (S7 gene) and mitochondrial genetic information (COI, D-loop and mitogenomes). We found that the genetic distance between P. argenteus and P. echinogaster was much smaller than that between other Pampus species, and both maximum likelihood and Bayesian phylogenetic trees yielded almost identical tree topologies. An additional and adjacent M repeat was found in the downstream region of the IQM gene cluster of P. argenteus and P. echinogaster, and the trnL2 gene of P. minor was translocated. The genus Pampus experienced early rapid radiation during the Palaeocene with major lineages diversifying within a relatively narrow timescale. Additionally, three different methods were conducted to distinguish the genus Pampus species, proving that P. argenteus and P. echinogaster are the same species, and P. liuorum is speculated to be a valid species. Overall, our study provides new insights not only into the evolutionary history of Pampus but its intraspecific taxonomy as well.
资助项目	Major Project of Science, Technology and Innovation 2025 In Ningbo City
WOS关键词	COMPLETE MITOCHONDRIAL GENOME ; SEQUENCE ; DNA ; IDENTIFICATION ; DESIGNATION ; DIVERSITY ; TELEOSTEI ; BARCODE
WOS研究方向	Agriculture ; Veterinary Sciences ; Zoology
语种	英语
出版者	MDPI
WOS记录号	WOS:001183281800001
内容类型	期刊论文
源URL	[http://ir.qdio.ac.cn/handle/337002/184804]
专题	海洋研究所_实验海洋生物学重点实验室
通讯作者	Wang, Yajun; Hu, Jiabao
作者单位	1.Ningbo Univ, Key Lab Marine Biotechnol Zhejiang Prov, Ningbo 315211, Peoples R China 2.Ningbo Univ, Key Lab Appl Marine Biotechnol, Minist Educ, Ningbo 315211, Peoples R China 3.Chinese Acad Sci, Inst Oceanol, Ctr Ocean Mega Sci, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China 4.Chinese Acad Sci, Lab Marine Organism Taxon & Phylogeny, Qingdao Key Lab Marine Biodivers & Conservat, Qingdao 266071, Peoples R China 5.Sun Yat Sen Univ, Sch Life Sci, Guangzhou 510275, Peoples R China 6.Ningbo Univ, Sch Marine Sci, Ningbo 315211, Peoples R China
推荐引用方式 GB/T 7714	Zhang, Cheng,Liu, Hanjing,Huang, Xiang,et al. Comparative Analysis of the Systematics and Evolution of the Pampus Genus of Fish (Perciformes: Stromateidae) Based on Osteology, Population Genetics and Complete Mitogenomes[J]. ANIMALS,2024,14(5):19.
APA	Zhang, Cheng.,Liu, Hanjing.,Huang, Xiang.,Yuan, Zi.,Zhang, Shun.,...&Hu, Jiabao.(2024).Comparative Analysis of the Systematics and Evolution of the Pampus Genus of Fish (Perciformes: Stromateidae) Based on Osteology, Population Genetics and Complete Mitogenomes.ANIMALS,14(5),19.
MLA	Zhang, Cheng,et al."Comparative Analysis of the Systematics and Evolution of the Pampus Genus of Fish (Perciformes: Stromateidae) Based on Osteology, Population Genetics and Complete Mitogenomes".ANIMALS 14.5(2024):19.