Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China
Luo, Tianyi4,5; Wang, Jiaojiao5; Wang, Quanyi2,3; Wang, Xiaoli2,3; Zhao, Pengfei5; Zeng, Daniel Dajun5; Zhang, Qingpeng1; Cao, Zhidong5
刊名International Journal of Infectious Diseases
2022-03
卷号116页码:411-417
关键词transmission chain data augmentation reconstruction COVID-19
DOIhttps://doi.org/10.1016/j.ijid.2022.01.035
英文摘要


Objectives: The aim of the study was to reconstruct the complete transmission chain of the COVID-19 outbreak in Beijing's Xinfadi Market using data from epidemiological investigations, which contributes to reflecting transmission dynamics and transmission risk factors.

Methods: We set up a transmission model, and the model parameters are estimated from the survey data via Markov chain Monte Carlo sampling. Bayesian data augmentation approaches are used to account for uncertainty in the source of infection, unobserved onset, and infection dates.
Results: The rate of transmission of COVID-19 within households is 9.2%. Older people are more susceptible to infection. The accuracy of our reconstructed transmission chain was 67.26%. In the gathering place of this outbreak, the Beef and Mutton Trading Hall of Xinfadi market, most of the transmission occurs within 20 m, only 19.61% of the transmission occurs over a wider area (>20 m), with an overall average transmission distance of 13.00 m. The deepest transmission generation is 9. In this outbreak, there were 2 abnormally high transmission events.

Conclusions: The statistical method of reconstruction of transmission trees from incomplete epidemic data provides a valuable tool to help understand the complex transmission factors and provides a practical guideline for investigating the characteristics of the development of epidemics and the formulation of control measures.

语种英语
内容类型期刊论文
源URL[http://ir.ia.ac.cn/handle/173211/48979]  
专题自动化研究所_复杂系统管理与控制国家重点实验室_互联网大数据与安全信息学研究中心
通讯作者Cao, Zhidong
作者单位1.School of Data Science, City University of Hong Kong, Hong Kong SAR
2.Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing
3.Beijing Research Center for Preventive Medicine, Beijing Center for Disease Prevention and Control, Beijing
4.University of Chinese Academy of Sciences, Beijing
5.Institute of Automation Chinese Academy of Sciences, Beijing
推荐引用方式
GB/T 7714
Luo, Tianyi,Wang, Jiaojiao,Wang, Quanyi,et al. Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China[J]. International Journal of Infectious Diseases,2022,116:411-417.
APA Luo, Tianyi.,Wang, Jiaojiao.,Wang, Quanyi.,Wang, Xiaoli.,Zhao, Pengfei.,...&Cao, Zhidong.(2022).Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China.International Journal of Infectious Diseases,116,411-417.
MLA Luo, Tianyi,et al."Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China".International Journal of Infectious Diseases 116(2022):411-417.
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