Nuclear and Chloroplast Sequences Resolve the Enigmatic Origin of the Concord Grape

doi:10.3389/fpls.2020.00263

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	Nuclear and Chloroplast Sequences Resolve the Enigmatic Origin of the Concord Grape
	Wen, Jun ; Herron, Sterling A.; Yang, Xue 1; Liu, Bin-Bin ; Zuo, Yun-Juan ; Harris, A. J.; Kalburgi, Yash ; Johnson, Gabriel ; Zimmer, Elizabeth A.
刊名	FRONTIERS IN PLANT SCIENCE
	2020
卷号	11
关键词	Concord grape grape origin Vitis Vitaceae
ISSN号	1664-462X
DOI	10.3389/fpls.2020.00263
文献子类	Article
英文摘要	Despite the commercial importance of the Concord grape, its origin has remained unresolved for over 150 years without a comprehensive phylogenetic analysis. In this study we aimed to reconstruct the evolutionary history of the Concord grape using sequence data from four nuclear markers (AT103, GAI1, PHYA, and SQD1), six plastid markers (matK, psbA-trnH, petN-trnC, ycf1, trnL-F, and trnS-G), and the plastid genome. We sampled extensively the Vitis species native to northeastern North America as well as representative species from Europe and Asia, including the commercially important Vitis vinifera (wine grape), a native European species with hermaphroditic flowers, and its wild progenitor, V. vinifera subsp. sylvestris. We also sequenced the plastid genome of one accession of the Concord grape and compared the plastid genome data to the recently published data set of Vitis plastomes. Phylogenetic analyses of the plastid and nuclear data using maximum likelihood and Bayesian inference support the hybrid origin of the Concord grape. The results clearly pinpoint the wine grape, V. vinifera, as the maternal donor and the fox grape, Vitis labrusca, which is common in northeastern North America, as the paternal donor. Moreover, we infer that the breeding history of the Concord grape must have involved the backcrossing of the F1 hybrid with the paternal parent V. labrusca. This backcrossing also explains the higher morphological similarity of the Concord grape to V. labrusca than to V. vinifera. This study provides concrete genetic evidence for the hybrid origin of a widespread Vitis cultivar and is, therefore, promising for similar future studies focused on resolving ambiguous origins of major crops or to create successful hybrid fruit crops.
学科主题	Plant Sciences
出版地	LAUSANNE
WOS关键词	BAYESIAN PHYLOGENETIC INFERENCE ; VITACEAE ; VITIS ; EVOLUTION ; PROTEIN ; DIVERSIFICATION ; DIFFERENTIATION ; PHYTOCHROME ; SIGNALS ; MODEL
WOS研究方向	Plant Sciences
语种	英语
出版者	FRONTIERS MEDIA SA
WOS记录号	WOS:000525535500001
资助机构	Washington Biologists Field Club ; Natural History Research Experiences (NHRE) ; National Science Foundation (REU Site)National Science Foundation (NSF) [EAR-1062692]
内容类型	期刊论文
源URL	[http://ir.ibcas.ac.cn/handle/2S10CLM1/21819]
专题	系统与进化植物学国家重点实验室
作者单位	1.Herron, Sterling A.] Donald Danforth Plant Sci Ctr, St Louis, MO USA 2.Harris, A. J.] Chinese Acad Sci, South China Bot Garden, Key Lab Plant Resources Conservat & Sustainable U, Guangzhou, Peoples R China 3.Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Mengla, Peoples R China 4.Kunming Univ, Agr Sch, Kunming, Yunnan, Peoples R China 5.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China 6.Harris, A. J.] Oberlin Coll & Conservatory, Dept Biol, Oberlin, OH USA 7.[Wen, Jun; Liu, Bin-Bin; Kalburgi, Yash; Johnson, Gabriel; Zimmer, Elizabeth A.] Smithsonian Inst, Dept Bot, Natl Museum Nat Hist, Washington, DC 20560 USA
推荐引用方式 GB/T 7714	Wen, Jun,Herron, Sterling A.,Yang, Xue,et al. Nuclear and Chloroplast Sequences Resolve the Enigmatic Origin of the Concord Grape[J]. FRONTIERS IN PLANT SCIENCE,2020,11.
APA	Wen, Jun.,Herron, Sterling A..,Yang, Xue.,Liu, Bin-Bin.,Zuo, Yun-Juan.,...&Zimmer, Elizabeth A..(2020).Nuclear and Chloroplast Sequences Resolve the Enigmatic Origin of the Concord Grape.FRONTIERS IN PLANT SCIENCE,11.
MLA	Wen, Jun,et al."Nuclear and Chloroplast Sequences Resolve the Enigmatic Origin of the Concord Grape".FRONTIERS IN PLANT SCIENCE 11(2020).