Dopamine D-1 receptor and serotonin 5-HT1A receptor agonist effects of the natural product (-)-stepholidine: molecular modelling and dynamics simulations | |
Gong, Yunguo2,3; Fu, Wei3; Chen, Kaixian1,3![]() | |
刊名 | MOLECULAR SIMULATION
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2012 | |
卷号 | 38期号:12页码:970-979 |
关键词 | molecular dynamics l-SPD (l-stepholidine) G-protein-coupled receptor (GPCR) D-1 receptor 5-HT1A receptor |
ISSN号 | 0892-7022 |
DOI | 10.1080/08927022.2012.679619 |
文献子类 | Article |
英文摘要 | In this study, by homology modelling and molecular dynamics (MD) simulation, models of l-stepholidine (l-SPD) activating the 5-HT1A and D-1 receptors were constructed. In 100-ns MD simulations, the D-1 and 5-HT1A receptors were activated by the partial agonist l-SPD, conforming with the global toggle switch activation model and the sequential activation model. The residues Y-7.53 and Y-5.58 swing significantly between different transmembrane (TM) domains after activation. Similarities between D-1 and 5-HT1A included (1) the outward motion of TM-5; (2) the ionic lock was independent of the tilt of TM-6 and (3) there was an apparent bending of TM-6, and the ring of l-SPD formed strong pi-pi interactions with residue W-6.48. Differences between the two included the following: (1) in 5-HT1A, l-SPD formed a hydrogen bond with Ala172(5.46) of TM-5, and the intracellular end of TM-5 moved outward slowly; that hydrogen bond did not form with the D-1 receptor; (2) l-SPD formed stronger interactions with D-3.32 and W-6.48 in the D-1 receptor than in the 5-HT1A receptor and (3) the hydrogen bonding network was somewhat different in SPD-5-HT1A and SPD-D-1 receptors. We propose the interaction between l-SPD and D-3.32 or/and W-6.48 is the original driving force during the whole activation process. |
WOS关键词 | PROTEIN-COUPLED RECEPTOR ; 2ND EXTRACELLULAR LOOP ; TOGGLE SWITCH MODEL ; CRYSTAL-STRUCTURE ; MECHANOSENSITIVE CHANNEL ; CONFORMATIONAL STATES ; L-STEPHOLIDINE ; ACTIVATION ; RHODOPSIN ; BINDING |
WOS研究方向 | Chemistry ; Physics |
语种 | 英语 |
出版者 | TAYLOR & FRANCIS LTD |
WOS记录号 | WOS:000308864000004 |
内容类型 | 期刊论文 |
源URL | [http://119.78.100.183/handle/2S10ELR8/278243] ![]() |
专题 | 药物发现与设计中心 |
通讯作者 | Fu, Wei |
作者单位 | 1.Chinese Acad Sci, Shanghai Inst Mat Med, Shanghai 201203, Peoples R China 2.Van Andel Res Inst, Grand Rapids, MI 49503 USA; 3.Fudan Univ, Sch Pharm, Shanghai 201203, Peoples R China; |
推荐引用方式 GB/T 7714 | Gong, Yunguo,Fu, Wei,Chen, Kaixian. Dopamine D-1 receptor and serotonin 5-HT1A receptor agonist effects of the natural product (-)-stepholidine: molecular modelling and dynamics simulations[J]. MOLECULAR SIMULATION,2012,38(12):970-979. |
APA | Gong, Yunguo,Fu, Wei,&Chen, Kaixian.(2012).Dopamine D-1 receptor and serotonin 5-HT1A receptor agonist effects of the natural product (-)-stepholidine: molecular modelling and dynamics simulations.MOLECULAR SIMULATION,38(12),970-979. |
MLA | Gong, Yunguo,et al."Dopamine D-1 receptor and serotonin 5-HT1A receptor agonist effects of the natural product (-)-stepholidine: molecular modelling and dynamics simulations".MOLECULAR SIMULATION 38.12(2012):970-979. |
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