The highly heterogeneous methylated genomes and diverse restriction-modification systems of bloom-forming Microcystis | |
Zhao, Liang3,4; Song, Yulong2; Li, Lin4; Gan, Nanqin4; Brand, Jerry J.1; Song, Lirong4 | |
刊名 | HARMFUL ALGAE
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2018-05-01 | |
卷号 | 75期号:1页码:87-93 |
关键词 | Microcystis Cyanobacterial bloom DNA methylation modification SMRT Methyltransferase Epigenetics |
ISSN号 | 1568-9883 |
DOI | 10.1016/j.hal.2018.04.005 |
英文摘要 | The occurrence of harmful Microcystis blooms is increasing in frequency in a myriad of freshwater ecosystems. Despite considerable research pertaining to the cause and nature of these blooms, the molecular mechanisms behind the cosmopolitan distribution and phenotypic diversity in Microcystis are still unclear. We compared the patterns and extent of DNA methylation in three strains of Microcystis, PCC 7806SL, NIES-2549 and FACHB-1757, using Single Molecule Real-Time (SMRT) sequencing technology. Intact restriction-modification (R-M) systems were identified from the genomes of these strains, and from two previously sequenced strains of Microcystis, NIES-843 and TAIHU98. A large number of methylation motifs and R-M genes were identified in these strains, which differ substantially among different strains. Of the 35 motifs identified, eighteen had not previously been reported. Strain NIES-843 contains a larger number of total putative methyltransferase genes than have been reported previously from any bacterial genome. Genomic comparisons reveal that methyltransferases (some partial) may have been acquired from the environment through horizontal gene transfer. (C) 2018 Elsevier B.V. All rights reserved. |
资助项目 | National Natural Science Foundation of China[41561144008] ; China Agriculture Research Systems[CAR-50] ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology[2016FBZ07] |
WOS关键词 | DNA ADENINE METHYLATION ; PATHOGEN HELICOBACTER-PYLORI ; SINGLE-MOLECULE ; TOXIC CYANOBACTERIUM ; METHYLTRANSFERASES ; AERUGINOSA ; METHYLOMES ; EVOLUTION ; VIRULENCE ; BACTERIA |
WOS研究方向 | Marine & Freshwater Biology |
语种 | 英语 |
出版者 | ELSEVIER SCIENCE BV |
WOS记录号 | WOS:000438969100008 |
资助机构 | National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; China Agriculture Research Systems ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; Biological Resources Service Network Initiative, Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology |
内容类型 | 期刊论文 |
源URL | [http://ir.ihb.ac.cn/handle/342005/34521] ![]() |
专题 | 水生生物研究所_藻类生物学及应用研究中心_期刊论文 |
通讯作者 | Song, Lirong |
作者单位 | 1.Univ Texas Austin, UTEX Culture Collect Algae, Austin, TX 78712 USA 2.Sun Yat Sen Univ, Sch Life Sci, Key Lab Gene Engn, State Key Lab Biocontrol,Minist Educ, Guangzhou 510275, Guangdong, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 4.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Hubei, Peoples R China |
推荐引用方式 GB/T 7714 | Zhao, Liang,Song, Yulong,Li, Lin,et al. The highly heterogeneous methylated genomes and diverse restriction-modification systems of bloom-forming Microcystis[J]. HARMFUL ALGAE,2018,75(1):87-93. |
APA | Zhao, Liang,Song, Yulong,Li, Lin,Gan, Nanqin,Brand, Jerry J.,&Song, Lirong.(2018).The highly heterogeneous methylated genomes and diverse restriction-modification systems of bloom-forming Microcystis.HARMFUL ALGAE,75(1),87-93. |
MLA | Zhao, Liang,et al."The highly heterogeneous methylated genomes and diverse restriction-modification systems of bloom-forming Microcystis".HARMFUL ALGAE 75.1(2018):87-93. |
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