A brief introduction to web-based genome browsers

doi:10.1093/bib/bbs029

CORC > 北京大学 > 生命科学学院

	A brief introduction to web-based genome browsers
	Wang, Jun ; Kong, Lei ; Gao, Ge ; Luo, Jingchu
刊名	briefings in bioinformatics
	2013
关键词	genome browsers genomic databases visualization data retrieval and analysis customization BIOLOGICAL DATA DATABASE RICE EPIGENOME RESOURCE PLATFORM OSSPL14 BIOMART
DOI	10.1093/bib/bbs029
英文摘要	Genome browser provides a graphical interface for users to browse, search, retrieve and analyze genomic sequence and annotation data. Web-based genome browsers can be classified into general genome browsers with multiple species and species-specific genome browsers. In this review, we attempt to give an overview for the main functions and features of web-based genome browsers, covering data visualization, retrieval, analysis and customization. To give a brief introduction to the multiple-species genome browser, we describe the user interface and main functions of the Ensembl and UCSC genome browsers using the human alpha-globin gene cluster as an example. We further use the MSU and the Rice-Map genome browsers to show some special features of species-specific genome browser, taking a rice transcription factor gene OsSPL14 as an example.; http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000316694700002&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=8e1609b174ce4e31116a60747a720701 ; Biochemical Research Methods; Mathematical & Computational Biology; SCI(E); PubMed; 12; EDITORIAL MATERIAL; 2,SI; 131-143; 14
语种	英语
内容类型	期刊论文
源URL	[http://ir.pku.edu.cn/handle/20.500.11897/319945]
专题	生命科学学院
推荐引用方式 GB/T 7714	Wang, Jun,Kong, Lei,Gao, Ge,et al. A brief introduction to web-based genome browsers[J]. briefings in bioinformatics,2013.
APA	Wang, Jun,Kong, Lei,Gao, Ge,&Luo, Jingchu.(2013).A brief introduction to web-based genome browsers.briefings in bioinformatics.
MLA	Wang, Jun,et al."A brief introduction to web-based genome browsers".briefings in bioinformatics (2013).