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	The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4
	Chang, Sijing1,2,3; Zhang, Gaosen3,4; Chen, Ximing3,4; Long, Haozhi4,5; Wang, Yilin5; Chen, Tuo2,3; Liu, Guangxiu3,4
刊名	STANDARDS IN GENOMIC SCIENCES
	2017-07-27
卷号	12页码:8
关键词	Pedobacter Crude oil Degradation Genome
ISSN号	1944-3277
DOI	10.1186/s40793-017-0249-z
通讯作者	Chen, Tuo(chentuo@lzb.ac.cn)
英文摘要	Pedobacter steynii DX4 was isolated from the soil of Tibetan Plateau and it can use crude oil as sole carbon and energy source at 15 degrees C. The genome of Pedobacter steynii DX4 has been sequenced and served as basis for analysis its metabolic mechanism. It is the first genome of crude oil degrading strain in Pedobacter genus. The 6.58 Mb genome has an average G + C content of 41.31% and encodes 5464 genes. In addition, annotation revealed that Pedobacter steynii DX4 has cold shock proteins, abundant response regulators for cell motility, and enzymes involved in energy conversion and fatty acid metabolism. The genomic characteristics could provide information for further study of oil-degrading microbes for recovery of crude oil polluted environment.
收录类别	SCI
WOS关键词	SP-NOV. ; MICROBIAL COMMUNITIES ; ALKANE HYDROXYLASE ; BACTERIA ; SOILS ; CLASSIFICATION ; CONTAMINATION ; PSYCHROPHILE ; DIVERSITY ; MECHANISM
WOS研究方向	Genetics & Heredity ; Microbiology
WOS类目	Genetics & Heredity ; Microbiology
语种	英语
出版者	BIOMED CENTRAL LTD
WOS记录号	WOS:000406794200001
内容类型	期刊论文
URI标识	http://www.corc.org.cn/handle/1471x/2557668
专题	寒区旱区环境与工程研究所
通讯作者	Chen, Tuo
作者单位	1.Univ Chinese Acad Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China 2.Chinese Acad Sci, Northwest Inst Eco Environm & Resources, State Key Lab Cryospher Sci, Lanzhou 730000, Gansu, Peoples R China 3.Key Lab Extreme Environm Microbial Resources & En, Lanzhou 730000, Gansu, Peoples R China 4.Chinese Acad Sci, Northwest Inst Ecoenvironm & Resources, Key Lab Desert & Desertificat, Lanzhou 730000, Gansu, Peoples R China 5.Jiangxi Agr Univ, Coll Biosci & Bioengn, Nanchang 330045, Jiangxi, Peoples R China
推荐引用方式 GB/T 7714	Chang, Sijing,Zhang, Gaosen,Chen, Ximing,et al. The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4[J]. STANDARDS IN GENOMIC SCIENCES,2017,12:8.
APA	Chang, Sijing.,Zhang, Gaosen.,Chen, Ximing.,Long, Haozhi.,Wang, Yilin.,...&Liu, Guangxiu.(2017).The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4.STANDARDS IN GENOMIC SCIENCES,12,8.
MLA	Chang, Sijing,et al."The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4".STANDARDS IN GENOMIC SCIENCES 12(2017):8.

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