Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area

doi:10.1002/ece3.3452

	Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area
	Zhao, Kai3,5,6 ; Liu, Sijia 3,4,5,6; Li, Guogang 1; Zhang, Renyi 2; Feng, Chenguang 3,4,5,6; Tian, Fei3,5,6 ; Tang, Yongtao 3,4,5,6; Wanghe, Kunyuan 3,4,5,6
刊名	ECOLOGY AND EVOLUTION
	2017-11-01
卷号	7 期号:22 页码:9602-9612
关键词	Historical Demography Phylogeography Pleistocene Glacial Refugia Schizopygopsis Stoliczkai Tibetan Plateau
ISSN号	2045-7758
DOI	10.1002/ece3.3452
文献子类	Article
英文摘要	Schizopygopsis stoliczkai (Cyprinidae, subfamily Schizothoracinae) is one of the major freshwater fishes endemic to the northwestern margin of the Tibetan Plateau. In the current study, we used mitochondrial DNA markers cytochrome b (Cyt b) and 16S rRNA (16S), as well as the nuclear marker, the second intron of the nuclear beta-actin gene (Act2), to uncover the phylogeography of S.stoliczkai. In total, we obtained 74 haplotypes from 403 mitochondrial concatenated sequences. The mtDNA markers depict the phylogenetic structures of S.stoliczkai, which consist of clade North and clade South. The split time of the two clades is dated back to 4.27Mya (95% HPD=1.96-8.20Mya). The estimated split time is earlier than the beginning of the ice age of Pleistocene (2.60Mya), suggesting that the northwestern area of the Tibetan Plateau probably contain at least two glacial refugia for S.stoliczkai. SAMOVA supports the formation of four groups: (i) the Karakash River group; (ii) The Lake Pangong group; (iii) the Shiquan River group; (iv) the Southern Basin group. Clade North included Karakash River, Lake Pangong, and Shiquan River groups, while seven populations of clade South share the haplotypes. Genetic diversity, star-like network, BSP analysis, as well as negative neutrality tests indicate recent expansions events of S.stoliczkai. Conclusively, our results illustrate the phylogeography of S.stoliczkai, implying the Shiquan River is presumably the main refuge for S.stoliczkai.
WOS关键词	SCHIZOTHORACINE FISHES TELEOSTEI ; ENVIRONMENTAL-CHANGES ; MOLECULAR PHYLOGENY ; POPULATION-GENETICS ; DNA POLYMORPHISM ; EAST-ASIA ; MITOCHONDRIAL ; UPLIFT ; CYPRINIFORMES ; GLACIATION
WOS研究方向	Environmental Sciences & Ecology ; Evolutionary Biology
语种	英语
出版者	WILEY
WOS记录号	WOS:000415900800033
资助机构	Key Innovation Plan of Chinese Academy of Sciences(KSCX2-EW-N-004) ; National Natural Science Foundation of China(31172070 ; 31572258)
内容类型	期刊论文
源URL	[http://ir.nwipb.ac.cn/handle/363003/13273]
专题	西北高原生物研究所_中国科学院西北高原生物研究所
通讯作者	Zhao, Kai
作者单位	1.Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Mengla, Peoples R China 2.Guizhou Normal Univ, Guiyang, Guizhou, Peoples R China 3.Univ Chinese Acad Sci, Beijing, Peoples R China 4.Qinghai Key Lab Anim Ecol Genom, Xining, Qinghai, Peoples R China 5.Chinese Acad Sci, Northwest Inst Plateau Biol, Lab Plateau Fish Evolutionary & Funct Genom, Xining, Qinghai, Peoples R China 6.Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining, Qinghai, Peoples R China
推荐引用方式 GB/T 7714	Zhao, Kai,Liu, Sijia,Li, Guogang,et al. Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area[J]. ECOLOGY AND EVOLUTION,2017,7(22):9602-9612.
APA	Zhao, Kai.,Liu, Sijia.,Li, Guogang.,Zhang, Renyi.,Feng, Chenguang.,...&Wanghe, Kunyuan.(2017).Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area.ECOLOGY AND EVOLUTION,7(22),9602-9612.
MLA	Zhao, Kai,et al."Phylogeography of Schizopygopsis stoliczkai (Cyprinidae) in Northwest Tibetan Plateau area".ECOLOGY AND EVOLUTION 7.22(2017):9602-9612.