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	Transcriptomic analysis of differentially expressed genes during larval development of rapana venosa by digital gene expression profiling
	Song, Hao1,2; Yu, Zheng-Lin1,2; Sun, Li-Na1; Xue, Dong-Xiu1; Zhang, Tao1; Wang, Hai-Yan1
刊名	G3-genes genomes genetics
	2016-07-01
卷号	6期号:7页码:2181-2193
关键词	Transcriptome Rapana venosa Gastropod Larva Digital gene expression
ISSN号	2160-1836
DOI	10.1534/g3.116.029314
通讯作者	Zhang, tao(tzhang@qdio.ac.cn) ; Wang, hai-yan(haiyanwang@qdio.ac.cn)
英文摘要	During the life cycle of shellfish, larval development, especially metamorphosis, has a vital influence on the dynamics, distribution, and recruitment of natural populations, as well as seed breeding. rapana venosa, a carnivorous gastropod, is an important commercial shellfish in china, and is an ecological invader in the united states, argentina, and france. however, information about the mechanism of its early development is still limited, because research in this area has long suffered from a lack of genomic resources. in this study, 15 digital gene expression (dge) libraries from five developmental stages of r. venosa were constructed and sequenced on the iiiumina hi-sequation 2500 platform. bioinformatics-analysis identified numerous differentially and specifically expressed genes, which revealed that genes associated with growth, nervous system, digestive system, immune system, and apoptosis participate in important developmental processes. the functional analysis of differentially expressed genes was further implemented by gene ontology, and kyoto encyclopedia of genes and genomes enrichment. dge profiling provided a general picture of the transcriptomic activities during the early development of r. venosa, which may provide interesting hints for further study. our data represent the first comparative transcriptomic information available for the early development of r. venosa, which is a prerequisite for a better understanding of the physiological traits controlling development.
WOS关键词	OYSTER CRASSOSTREA-GIGAS ; SNAIL ILYANASSA-OBSOLETA ; MOLECULAR CHARACTERIZATION ; HALIOTIS-ASININA ; FEMALE SIZE ; RNA-SEQ ; METAMORPHOSIS ; SEROTONIN ; ABALONE ; VALENCIENNES
WOS研究方向	Genetics & Heredity
WOS类目	Genetics & Heredity
语种	英语
出版者	GENETICS SOCIETY AMERICA
WOS记录号	WOS:000379590200038
内容类型	期刊论文
URI标识	http://www.corc.org.cn/handle/1471x/2374712
专题	中国科学院大学
通讯作者	Zhang, Tao; Wang, Hai-Yan
作者单位	1.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, 7 Nanhai Rd, Qingdao 266071, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式 GB/T 7714	Song, Hao,Yu, Zheng-Lin,Sun, Li-Na,et al. Transcriptomic analysis of differentially expressed genes during larval development of rapana venosa by digital gene expression profiling[J]. G3-genes genomes genetics,2016,6(7):2181-2193.
APA	Song, Hao,Yu, Zheng-Lin,Sun, Li-Na,Xue, Dong-Xiu,Zhang, Tao,&Wang, Hai-Yan.(2016).Transcriptomic analysis of differentially expressed genes during larval development of rapana venosa by digital gene expression profiling.G3-genes genomes genetics,6(7),2181-2193.
MLA	Song, Hao,et al."Transcriptomic analysis of differentially expressed genes during larval development of rapana venosa by digital gene expression profiling".G3-genes genomes genetics 6.7(2016):2181-2193.

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