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Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees
He, Zilong1,2; Zhang, Huangkai1,2; Gao, Shenghan1; Lercher, Martin J.3,4; Chen, Wei-Hua1,5,6; Hu, Songnian1,2
刊名Nucleic acids research
2016-07-08
卷号44期号:W1页码:W236-w241
ISSN号0305-1048
DOI10.1093/nar/gkw370
通讯作者Chen, wei-hua(chenwh550@gmail.com) ; Hu, songnian(husn@big.ac.cn)
英文摘要Evolview is an online visualization and management tool for customized and annotated phylogenetic trees. it allows users to visualize phylogenetic trees in various formats, customize the trees through built-in functions and user-supplied datasets and export the customization results to publication-ready figures. its 'dataset system' contains not only the data to be visualized on the tree, but also 'modifiers' that control various aspects of the graphical annotation. evolview is a single-page application (like gmail); its carefully designed interface allows users to upload, visualize, manipulate and manage trees and datasets all in a single webpage. developments since the last public release include a modern dataset editor with keyword highlighting functionality, seven newly added types of annotation datasets, collaboration support that allows users to share their trees and datasets and various improvements of the web interface and performance. in addition, we included eleven new 'demo' trees to demonstrate the basic functionalities of evolview, and five new 'showcase' trees inspired by publications to showcase the power of evolview in producing publication-ready figures. evolview is freely available at: http://www.evolgenius.info/evolview/.
WOS关键词GENE-TRANSFER ; EVOLUTION ; GENOME ; INTEGRATION ; FAMILY ; LIFE ; WEB
WOS研究方向Biochemistry & Molecular Biology
WOS类目Biochemistry & Molecular Biology
语种英语
出版者OXFORD UNIV PRESS
WOS记录号WOS:000379786800039
内容类型期刊论文
URI标识http://www.corc.org.cn/handle/1471x/2374580
专题中国科学院大学
通讯作者Chen, Wei-Hua; Hu, Songnian
作者单位1.Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genome Sci & Informat, 7 Beitucheng West Rd, Beijing 100029, Peoples R China
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
3.Univ Dusseldorf, Inst Comp Sci, D-40225 Dusseldorf, Germany
4.Univ Dusseldorf, Cluster Excellence Plant Sci CEPLAS, D-40225 Dusseldorf, Germany
5.Chinese Acad Sci, Beijing Inst Genom, BIG Data Ctr, 7 Beitucheng West Rd, Beijing 100029, Peoples R China
6.Univ Geneva, Sch Med, Dept Genet Med & Dev, CH-1211 Geneva, Switzerland
推荐引用方式
GB/T 7714
He, Zilong,Zhang, Huangkai,Gao, Shenghan,et al. Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees[J]. Nucleic acids research,2016,44(W1):W236-w241.
APA He, Zilong,Zhang, Huangkai,Gao, Shenghan,Lercher, Martin J.,Chen, Wei-Hua,&Hu, Songnian.(2016).Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees.Nucleic acids research,44(W1),W236-w241.
MLA He, Zilong,et al."Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees".Nucleic acids research 44.W1(2016):W236-w241.
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