quantwiz: a parallel software package for lc-ms-based label-free     protein quantification

CORC > 软件研究所 > 并行计算实验室 > 会议论文

	quantwiz: a parallel software package for lc-ms-based label-free protein quantification
	Wang Jing ; Zhang Yunquan ; Zhang Xianyi ; Sun Xiangzheng ; Hu Zelin ; Li Sujun ; Zeng Rong
	2009
会议名称	11th IEEE International Conference on High Performance Computing and Communications
会议日期	JUN 25-27,
会议地点	Seoul, SOUTH KOREA
关键词	protein quantification mass spectrometry label-free abundance ratio parallelization
英文摘要	Nowadays Proteomics becomes more and more popular in life science. Protein quantification, especially based on mass spectrometry (short for MS) method, is perceived as an essential part of research on proteomics. There have been some algorithms and software for protein quantification based on MS. But they have difficulties on portability, applicability and longtime running. To solve these problems, we developed a new domestic parallel software package called QuaniWiz for high performance Liquid Chromatography (short for LC)-MS-based label-free protein quantification. In this paper, we described the framework design and prototype development of this high performance software package firstly. Also, user interface developed for the visualization of QuantWiz is introduced Finally, we showed implementation of the parallelization version and performance of some experiments on this software package.
会议主办者	IEEE Comp Soc, IEEE
会议录	2009 11th IEEE International Conference on High Performance Computing and Communications, HPCC 2009
会议录出版者	HPCC: 2009 11TH IEEE INTERNATIONAL CONFERENCE ON HIGH PERFORMANCE COMPUTING AND COMMUNICATIONS
会议录出版地	345 E 47TH ST, NEW YORK, NY 10017 USA
ISBN号	978-1-4244-4600-1
内容类型	会议论文
源URL	[http://124.16.136.157/handle/311060/8290]
专题	软件研究所_并行计算实验室 _会议论文
推荐引用方式 GB/T 7714	Wang Jing,Zhang Yunquan,Zhang Xianyi,et al. quantwiz: a parallel software package for lc-ms-based label-free protein quantification[C]. 见:11th IEEE International Conference on High Performance Computing and Communications. Seoul, SOUTH KOREA. JUN 25-27,.