Characterization of a HoxEFUYH type of [NiFe] hydrogenase from Allochromatium vinosum and some EPR and IR properties of the hydrogenase module | |
Long, Minnan ; Long MN(龙敏南) ; Liu, Jingjing ; Chen, Zhifeng ; Bleijlevens, Boris(Univ Amsterdam, Swammerdam Inst Life Sci, NL-1018 WV Amsterdam, Netherlands) ; Roseboom, Winfried(Univ Amsterdam, Swammerdam Inst Life Sci, NL-1018 WV Amsterdam, Netherlands) ; Albracht, Simon P. J.(Univ Amsterdam, Swammerdam Inst Life Sci, NL-1018 WV Amsterdam, Netherlands) | |
2007 | |
关键词 | soluble [NiFe] hydrogenase Allochromatium vinosum purification sequence NADH ubiquinone oxidoreductase |
英文摘要 | A soluble hydrogenase from Allochromatium vinosum was purified. It consisted of a large (M-r = 52 kDa) and a small (M-r = 23 kDa) subunit. The genes encoding for both subunits were identified. They belong to an open reading frame where they are preceded by three more genes. A DNA fragment containing all five genes was cloned and sequenced. The deduced amino acid sequences of the products characterized the complex as a member of the HoxEFUYH type of [NiFe] hydrogenases. Detailed sequence analyses revealed binding sites for eight Fe-S clusters, three [2Fe-2S] clusters and five [4Fe-4S] clusters, six of which are also present in homologous subunits of [FeFe] hydrogenases and NADH:ubiquione oxidoreductases (complex I). This makes the HoxEFUYH type of hydrogenases the one that is evolutionary closest to complex I. The relative positions of six of the potential Fe-S clusters are predicted on the basis of the X-ray structures of the Clostridium pasteurianum [FeFe] hydrogenase I and the hydrophilic domain of complex I from Thermus thermophilus. Although the HoxF subunit contains binding sites for flavin mononucleotide and NAD(H), cell-free extracts of A. vinosum did not catalyse a H-2-dependent reduction of NAD(+). Only the hydrogenase module (HoxYH) could be purified. Its electron paramagnetic resonance (EPR) and IR spectral properties showed the presence of a Ni-Fe active site and a [4Fe-4S] cluster. Its activity was sensitive to carbon monoxide. No EPR signals from a light-sensitive Ni-a-C* state could be observed. This study presents the first IR spectroscopic data on the HoxYH module of a HoxEFUYH type of [NiFe] hydrogenase. |
语种 | 英语 |
出版者 | SPRINGER |
内容类型 | 期刊论文 |
源URL | [http://dx.doi.org/doi:10.1007/s00775-006-0162-1] ![]() |
专题 | 生命科学-已发表论文 |
推荐引用方式 GB/T 7714 | Long, Minnan,Long MN,Liu, Jingjing,et al. Characterization of a HoxEFUYH type of [NiFe] hydrogenase from Allochromatium vinosum and some EPR and IR properties of the hydrogenase module[J],2007. |
APA | Long, Minnan.,龙敏南.,Liu, Jingjing.,Chen, Zhifeng.,Bleijlevens, Boris.,...&Albracht, Simon P. J..(2007).Characterization of a HoxEFUYH type of [NiFe] hydrogenase from Allochromatium vinosum and some EPR and IR properties of the hydrogenase module.. |
MLA | Long, Minnan,et al."Characterization of a HoxEFUYH type of [NiFe] hydrogenase from Allochromatium vinosum and some EPR and IR properties of the hydrogenase module".(2007). |
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