Sinobacterium caligoides gen nov, sp nov, a new member of the family Oceanospirillaceae isolated from the South China Sea, and emended description of Amphritea japonica

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	Sinobacterium caligoides gen nov, sp nov, a new member of the family Oceanospirillaceae isolated from the South China Sea, and emended description of Amphritea japonica
	Su, Jianqiang ; Zhou, Yanyan ; Lai, Qiliang ; Li, Xinyi ; Dong, Peiyan ; Yang, Xiaoru ; Zhang, Bangzhou ; Zhang, Jinlong ; Zheng, Xiaowei ; Tian, Yun ; Zheng, Tianling ; Su JQ(苏建强) ; Tian Y(田蕴) ; Zheng TL(郑天凌)
刊名	http://dx.doi.org/10.1099/ijs.0.030965-0
	2013
关键词	GENOME-SEQUENCED GAMMAPROTEOBACTERIUM SPERM-WHALE CARCASSES MARINE BACTERIUM SEDIMENT ADJACENT NEPTUNOMONAS JAPAN NEPTUNIIBACTER HYDROCARBONS KAGOSHIMA WATER
英文摘要	National Natural Science Foundation of China [40930847, 31070442, 30800033, 31070101]; Public Science and Technology Research Funds Projects of Ocean [201305016, 201305041]; Program for Changjiang Scholars and Innovative Research Team in University [41121091]; State Key Laboratory of Marine Environmental Science, Xiamen University [MELRS1124]; A taxonomic study was carried out on strain SCSWE24(T), isolated from a seawater sample collected from the South China Sea. Cells of strain SCSWE24(T) were Gram-negative, rod-shaped, non-motile, moderately halophilic and capable of reducing nitrate to nitrite. Growth was observed at salinities from 1.5 to 4.5% and at 4-37 degrees C; it was unable to degrade gelatin. The dominant fatty acids (>15 %) were summed feature 3 (C-16:1 omega 7c and/or C-16:1 omega 6c; 50.4 %) and C-16:0 (21.1 %). The G+C content of the chromosomal DNA was 58.8 mol%. 16S rRNA gene sequence comparisons showed that strain SCSWE24(T) was most closely related to an uncultured bacterium clone Tun3b.F5 (98%; GenBank accession no. FJ169216), and showed 92% similarity to an endosymbiont bacterium from the bone-eating worm Osedax mucofloris (clone Omu 9 c4791; FN773233). Levels of similarity between strain SCSWE24(T) and type strains of recognized species in the family Oceanospirillaceae were less than 93%; the highest similarity was 92%, to both Amphritea japonica JAMM 1866(T) and 'Oceanicoccus sagamiensis' PZ-5. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain SCSWE24(T) formed a distinct evolutionary lineage within the family Oceanospirillaceae. Strain SCSWE24(T) was distinguishable from members of phylogenetically related genera by differences in several phenotypic properties. On the basis of the phenotypic and phylogenetic data, strain SCSWE24(T) represents a novel species of a new genus, for which the name Sinobacterium caligoides gen. nov., sp. nov. is proposed. The type strain of Sinobacterium caligoides is SCSWE24(T) (=CCTCC AS 209289(T) =LMG 25705(T) =MCCC 1F01088(T)). An emended description of Amphritea japonica is also provided.
语种	英语
出版者	SOC GENERAL MICROBIOLOGY
内容类型	期刊论文
源URL	[http://dspace.xmu.edu.cn/handle/2288/88013]
专题	海洋环境－已发表论文
推荐引用方式 GB/T 7714	Su, Jianqiang,Zhou, Yanyan,Lai, Qiliang,et al. Sinobacterium caligoides gen nov, sp nov, a new member of the family Oceanospirillaceae isolated from the South China Sea, and emended description of Amphritea japonica[J]. http://dx.doi.org/10.1099/ijs.0.030965-0,2013.
APA	Su, Jianqiang.,Zhou, Yanyan.,Lai, Qiliang.,Li, Xinyi.,Dong, Peiyan.,...&郑天凌.(2013).Sinobacterium caligoides gen nov, sp nov, a new member of the family Oceanospirillaceae isolated from the South China Sea, and emended description of Amphritea japonica.http://dx.doi.org/10.1099/ijs.0.030965-0.
MLA	Su, Jianqiang,et al."Sinobacterium caligoides gen nov, sp nov, a new member of the family Oceanospirillaceae isolated from the South China Sea, and emended description of Amphritea japonica".http://dx.doi.org/10.1099/ijs.0.030965-0 (2013).