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Development and evaluation of specific 16S rDNA primers for marine Cytophaga-Flavobacteria cluster
Chen, Xihan ; Zeng, Yonghui ; Jiao, Nianzhi ; Jiao NZ(焦念志)
2006-09-21
关键词16S rDNA clone library Cytophaga-Flavobacteria diversity marine environments primer design
英文摘要Through multiple alignment analysis of 16S rDNA sequences from all known genera of Cytophaga-Flavobacteria (CF) cluster, a new primer pair specifically targeting this cluster was developed, greatly facilitating their diversity and function's exploration in marine ecosystems. Compared with previously reported primers, the new primer pair could theoretically retrieve broader CF diversity without decreasing specificity. The effectiveness for field samples was further evaluated by testing the community DNA samples from various marine environments using the optimal polymerase chain reaction (PCR) conditions established in this work. The results showed its robustness and high specificity for amplifying CF cluster's 16S rDNA fragments from complex marine environments.
语种英语
出版者BLACKWELL PUBLISHING
内容类型期刊论文
源URL[http://dx.doi.org/doi:10.1111/j.1471-8286.2006.01514.x]  
专题海洋环境-已发表论文
推荐引用方式
GB/T 7714
Chen, Xihan,Zeng, Yonghui,Jiao, Nianzhi,et al. Development and evaluation of specific 16S rDNA primers for marine Cytophaga-Flavobacteria cluster[J],2006.
APA Chen, Xihan,Zeng, Yonghui,Jiao, Nianzhi,&焦念志.(2006).Development and evaluation of specific 16S rDNA primers for marine Cytophaga-Flavobacteria cluster..
MLA Chen, Xihan,et al."Development and evaluation of specific 16S rDNA primers for marine Cytophaga-Flavobacteria cluster".(2006).
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