The complete genome of hydrocarbon-degrading Pseudoalteromonas sp NJ289 and its phylogenetic relationship

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	The complete genome of hydrocarbon-degrading Pseudoalteromonas sp NJ289 and its phylogenetic relationship
	Liu Fangming1,2,3 ; Wang Yibin 3; Qu Changfeng3 ; Zheng Zhou 3; Miao Jinlai 3; Xu Hua 4; Xiao Tian 1
刊名	ACTA OCEANOLOGICA SINICA
	2017-02-01
卷号	36 期号:2 页码:88-93
关键词	Pseudoalteromonas low temperature environmental adaptability sequencing phylogenetic tree
英文摘要	Genus Pseudoalteromonas belongs to Family Pseudoalteromonadaceae in Gammaproteobacteria. A cold-adapted gram-negative bacterium, hydrocarbon-degrading Pseudoalteromonas sp. NJ289, was isolated from sea-ice of the Antarctica region, and sequenced the whole genome through the next generation sequencing platform. The assembly yielded three contigs representing two chromosomes and one plasmid with the sizes of 3.2 Mb, 636 kb and 1.8 kb, respectively. The G+C contents of genome were 40.83% and included 3 589 ORFs. Functional annotation indicated some potential roles in enzymatic activity and environmental adaptability. This study may help for understanding the population diverse, evolutionary ecology and the microbial interaction.
收录类别	SCI
语种	英语
WOS记录号	WOS:000393672200011
内容类型	期刊论文
版本	出版稿
源URL	[http://ir.qdio.ac.cn/handle/337002/136372]
专题	海洋研究所_海洋生态与环境科学重点实验室
作者单位	1.Chinese Acad Sci, Inst Oceanol, Qingdao 266071, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.State Ocean Adm, Inst Oceanog 1, Qingdao 266061, Peoples R China 4.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Minist Agr, Key Lab Sustainable Dev Marine Fisheries, Qingdao 266071, Peoples R China
推荐引用方式 GB/T 7714	Liu Fangming,Wang Yibin,Qu Changfeng,et al. The complete genome of hydrocarbon-degrading Pseudoalteromonas sp NJ289 and its phylogenetic relationship[J]. ACTA OCEANOLOGICA SINICA,2017,36(2):88-93.
APA	Liu Fangming.,Wang Yibin.,Qu Changfeng.,Zheng Zhou.,Miao Jinlai.,...&Xiao Tian.(2017).The complete genome of hydrocarbon-degrading Pseudoalteromonas sp NJ289 and its phylogenetic relationship.ACTA OCEANOLOGICA SINICA,36(2),88-93.
MLA	Liu Fangming,et al."The complete genome of hydrocarbon-degrading Pseudoalteromonas sp NJ289 and its phylogenetic relationship".ACTA OCEANOLOGICA SINICA 36.2(2017):88-93.