The complete mitochondrial genome of peacock sole Pardachirus pavoninus (Pleuronectiformes: Soleidae) and comparative analysis of the control region among 13 soles

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	The complete mitochondrial genome of peacock sole Pardachirus pavoninus (Pleuronectiformes: Soleidae) and comparative analysis of the control region among 13 soles
	Gong, L.1; Shi, W.1; Si, L. -Z.1; Wang, Z. -M.1; Kong, X. -Y.1
刊名	MOLECULAR BIOLOGY
	2015
卷号	49 期号:3 页码:408-417
关键词	flatfish O-L heteroplasmy tandem repeat termination associated sequence
通讯作者	xykong@scsio.ac.cn
英文摘要	The complete mitogenome of the peacock sole Pardachirus pavoninus (LacepSde, 1802) was determined. The total length is 16536 bp, containing 13 protein-coding genes, 22 tRNA genes and two rRNA genes, as well as one control region (CR). The L-strand replication origin (O-L), which is typically located in the WANCY cluster, is lost in P. pavoninus. The gene arrangement is identical to that in most teleosts. Comparison of the CR sequences among 13 soles reveals that a 211-bp fragment at the 5'-end of the CR is lost in the P. pavoninus mitogenome, responsible for its short sequence with a length of 872 bp. All typical conservative blocks (TAS, CSB-F, E, D, C, B, A, CSB-1, 2, 3) are identified. Seven out of 13 soles contain tandem repeats in the CR and the possible mechanisms of their formation are discussed. These results may provide the consensus sequences of the conserved units in the sole CR as well as molecular data for phylogenetic studies on Soleidae and Pleuronectiformes.
学科主题	Biochemistry & Molecular Biology
原文出处	0026-8933
内容类型	期刊论文
源URL	[http://ir.scsio.ac.cn/handle/344004/14834]
专题	南海海洋研究所_中科院海洋生物资源可持续利用重点实验室
作者单位	1.[Gong, L. 2.Shi, W. 3.Si, L. -Z. 4.Kong, X. -Y.] Chinese Acad Sci, South China Sea Inst Oceanol, Key Lab Trop Marine Bioresources & Ecol, Guangzhou 510000, Guangdong, Peoples R China 5.[Gong, L. 6.Si, L. -Z.] Univ Chinese Acad Sci, Beijing 100000, Peoples R China 7.[Wang, Z. -M.] Marine Fisheries Res Inst Zhejiang, Zhoushan 316021, Peoples R China
推荐引用方式 GB/T 7714	Gong, L.,Shi, W.,Si, L. -Z.,et al. The complete mitochondrial genome of peacock sole Pardachirus pavoninus (Pleuronectiformes: Soleidae) and comparative analysis of the control region among 13 soles[J]. MOLECULAR BIOLOGY,2015,49(3):408-417.
APA	Gong, L.,Shi, W.,Si, L. -Z.,Wang, Z. -M.,&Kong, X. -Y..(2015).The complete mitochondrial genome of peacock sole Pardachirus pavoninus (Pleuronectiformes: Soleidae) and comparative analysis of the control region among 13 soles.MOLECULAR BIOLOGY,49(3),408-417.
MLA	Gong, L.,et al."The complete mitochondrial genome of peacock sole Pardachirus pavoninus (Pleuronectiformes: Soleidae) and comparative analysis of the control region among 13 soles".MOLECULAR BIOLOGY 49.3(2015):408-417.